Research

Computational approaches for understanding host–pathogen biology

Conservation and modularity in the pan-bacterial psp stress response system

An integrative computational evolutionary approach to accelerate the discovery of molecular targets in prevalent under-studied pathogens

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Bacterial Stress Response

Studying stress response systems using molecular evolution and phylogenetics.

Using computational appraches to understand host-pathogen biology

Variations on a theme: evolution of the phage-shock-protein system in Actinobacteria

Evolution and Conservation of the Psp Envelope Stress-Response System

Reconstruction and topological characterization of the sigma factor regulatory network of Mycobacterium tuberculosis

Accessory sigma factors, which reprogram RNA polymerase to transcribe specific gene sets, activate bacterial adaptive responses to noxious environments. Here we reconstruct the complete sigma factor regulatory network of the human pathogen …